mirror of
https://gitee.com/milvus-io/milvus.git
synced 2024-12-03 20:39:36 +08:00
9f8095996b
Signed-off-by: groot <yihua.mo@zilliz.com>
592 lines
22 KiB
Go
592 lines
22 KiB
Go
// Licensed to the LF AI & Data foundation under one
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// or more contributor license agreements. See the NOTICE file
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// distributed with this work for additional information
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// regarding copyright ownership. The ASF licenses this file
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// to you under the Apache License, Version 2.0 (the
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// "License"); you may not use this file except in compliance
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// with the License. You may obtain a copy of the License at
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//
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// http://www.apache.org/licenses/LICENSE-2.0
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//
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// Unless required by applicable law or agreed to in writing, software
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// distributed under the License is distributed on an "AS IS" BASIS,
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// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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// See the License for the specific language governing permissions and
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// limitations under the License.
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package importutil
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import (
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"bufio"
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"context"
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"fmt"
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"strconv"
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"go.uber.org/zap"
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"github.com/milvus-io/milvus-proto/go-api/commonpb"
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"github.com/milvus-io/milvus-proto/go-api/schemapb"
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"github.com/milvus-io/milvus/internal/allocator"
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"github.com/milvus-io/milvus/internal/common"
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"github.com/milvus-io/milvus/internal/log"
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"github.com/milvus-io/milvus/internal/proto/datapb"
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"github.com/milvus-io/milvus/internal/proto/rootcoordpb"
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"github.com/milvus-io/milvus/internal/storage"
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"github.com/milvus-io/milvus/internal/util/retry"
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"github.com/milvus-io/milvus/internal/util/timerecord"
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)
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const (
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JSONFileExt = ".json"
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NumpyFileExt = ".npy"
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// supposed size of a single block, to control a binlog file size, the max biglog file size is no more than 2*SingleBlockSize
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SingleBlockSize = 16 * 1024 * 1024 // 16MB
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// this limitation is to avoid this OOM risk:
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// for column-based file, we read all its data into memory, if user input a large file, the read() method may
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// cost extra memory and lear to OOM.
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MaxFileSize = 16 * 1024 * 1024 * 1024 // 16GB
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// this limitation is to avoid this OOM risk:
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// simetimes system segment max size is a large number, a single segment fields data might cause OOM.
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// flush the segment when its data reach this limitation, let the compaction to compact it later.
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MaxSegmentSizeInMemory = 512 * 1024 * 1024 // 512MB
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// this limitation is to avoid this OOM risk:
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// if the shard number is a large number, although single segment size is small, but there are lot of in-memory segments,
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// the total memory size might cause OOM.
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// TODO: make it configurable.
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MaxTotalSizeInMemory = 6 * 1024 * 1024 * 1024 // 6GB
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// progress percent value of persist state
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ProgressValueForPersist = 90
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// keywords of import task informations
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FailedReason = "failed_reason"
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Files = "files"
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CollectionName = "collection"
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PartitionName = "partition"
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PersistTimeCost = "persist_cost"
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ProgressPercent = "progress_percent"
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)
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// ReportImportAttempts is the maximum # of attempts to retry when import fails.
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var ReportImportAttempts uint = 10
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type ImportFlushFunc func(fields map[storage.FieldID]storage.FieldData, shardID int) error
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type AssignSegmentFunc func(shardID int) (int64, string, error)
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type CreateBinlogsFunc func(fields map[storage.FieldID]storage.FieldData, segmentID int64) ([]*datapb.FieldBinlog, []*datapb.FieldBinlog, error)
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type SaveSegmentFunc func(fieldsInsert []*datapb.FieldBinlog, fieldsStats []*datapb.FieldBinlog, segmentID int64, targetChName string, rowCount int64) error
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type WorkingSegment struct {
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segmentID int64 // segment ID
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shardID int // shard id
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targetChName string // target dml channel
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rowCount int64 // accumulate row count
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memSize int // total memory size of all binlogs
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fieldsInsert []*datapb.FieldBinlog // persisted binlogs
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fieldsStats []*datapb.FieldBinlog // stats of persisted binlogs
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}
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type ImportWrapper struct {
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ctx context.Context // for canceling parse process
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cancel context.CancelFunc // for canceling parse process
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collectionSchema *schemapb.CollectionSchema // collection schema
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shardNum int32 // sharding number of the collection
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segmentSize int64 // maximum size of a segment(unit:byte) defined by dataCoord.segment.maxSize (milvus.yml)
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rowIDAllocator *allocator.IDAllocator // autoid allocator
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chunkManager storage.ChunkManager
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assignSegmentFunc AssignSegmentFunc // function to prepare a new segment
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createBinlogsFunc CreateBinlogsFunc // function to create binlog for a segment
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saveSegmentFunc SaveSegmentFunc // function to persist a segment
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importResult *rootcoordpb.ImportResult // import result
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reportFunc func(res *rootcoordpb.ImportResult) error // report import state to rootcoord
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reportImportAttempts uint // attempts count if report function get error
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workingSegments map[int]*WorkingSegment // a map shard id to working segments
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progressPercent int64 // working progress percent
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}
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func NewImportWrapper(ctx context.Context, collectionSchema *schemapb.CollectionSchema, shardNum int32, segmentSize int64,
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idAlloc *allocator.IDAllocator, cm storage.ChunkManager, importResult *rootcoordpb.ImportResult,
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reportFunc func(res *rootcoordpb.ImportResult) error) *ImportWrapper {
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if collectionSchema == nil {
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log.Error("import wrapper: collection schema is nil")
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return nil
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}
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// ignore the RowID field and Timestamp field
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realSchema := &schemapb.CollectionSchema{
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Name: collectionSchema.GetName(),
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Description: collectionSchema.GetDescription(),
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AutoID: collectionSchema.GetAutoID(),
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Fields: make([]*schemapb.FieldSchema, 0),
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}
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for i := 0; i < len(collectionSchema.Fields); i++ {
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schema := collectionSchema.Fields[i]
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if schema.GetName() == common.RowIDFieldName || schema.GetName() == common.TimeStampFieldName {
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continue
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}
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realSchema.Fields = append(realSchema.Fields, schema)
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}
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ctx, cancel := context.WithCancel(ctx)
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wrapper := &ImportWrapper{
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ctx: ctx,
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cancel: cancel,
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collectionSchema: realSchema,
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shardNum: shardNum,
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segmentSize: segmentSize,
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rowIDAllocator: idAlloc,
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chunkManager: cm,
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importResult: importResult,
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reportFunc: reportFunc,
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reportImportAttempts: ReportImportAttempts,
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workingSegments: make(map[int]*WorkingSegment),
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}
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return wrapper
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}
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func (p *ImportWrapper) SetCallbackFunctions(assignSegmentFunc AssignSegmentFunc, createBinlogsFunc CreateBinlogsFunc, saveSegmentFunc SaveSegmentFunc) error {
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if assignSegmentFunc == nil {
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log.Error("import wrapper: callback function AssignSegmentFunc is nil")
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return fmt.Errorf("callback function AssignSegmentFunc is nil")
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}
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if createBinlogsFunc == nil {
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log.Error("import wrapper: callback function CreateBinlogsFunc is nil")
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return fmt.Errorf("callback function CreateBinlogsFunc is nil")
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}
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if saveSegmentFunc == nil {
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log.Error("import wrapper: callback function SaveSegmentFunc is nil")
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return fmt.Errorf("callback function SaveSegmentFunc is nil")
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}
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p.assignSegmentFunc = assignSegmentFunc
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p.createBinlogsFunc = createBinlogsFunc
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p.saveSegmentFunc = saveSegmentFunc
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return nil
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}
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// Cancel method can be used to cancel parse process
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func (p *ImportWrapper) Cancel() error {
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p.cancel()
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return nil
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}
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// fileValidation verify the input paths
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// if all the files are json type, return true
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// if all the files are numpy type, return false, and not allow duplicate file name
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func (p *ImportWrapper) fileValidation(filePaths []string) (bool, error) {
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// use this map to check duplicate file name(only for numpy file)
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fileNames := make(map[string]struct{})
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totalSize := int64(0)
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rowBased := false
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for i := 0; i < len(filePaths); i++ {
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filePath := filePaths[i]
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name, fileType := GetFileNameAndExt(filePath)
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// only allow json file or numpy file
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if fileType != JSONFileExt && fileType != NumpyFileExt {
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log.Error("import wrapper: unsupported file type", zap.String("filePath", filePath))
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return false, fmt.Errorf("unsupported file type: '%s'", filePath)
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}
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// we use the first file to determine row-based or column-based
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if i == 0 && fileType == JSONFileExt {
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rowBased = true
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}
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// check file type
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// row-based only support json type, column-based only support numpy type
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if rowBased {
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if fileType != JSONFileExt {
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log.Error("import wrapper: unsupported file type for row-based mode", zap.String("filePath", filePath))
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return rowBased, fmt.Errorf("unsupported file type for row-based mode: '%s'", filePath)
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}
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} else {
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if fileType != NumpyFileExt {
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log.Error("import wrapper: unsupported file type for column-based mode", zap.String("filePath", filePath))
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return rowBased, fmt.Errorf("unsupported file type for column-based mode: '%s'", filePath)
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}
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}
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// check dupliate file
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_, ok := fileNames[name]
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if ok {
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log.Error("import wrapper: duplicate file name", zap.String("filePath", filePath))
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return rowBased, fmt.Errorf("duplicate file: '%s'", filePath)
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}
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fileNames[name] = struct{}{}
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// check file size, single file size cannot exceed MaxFileSize
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size, err := p.chunkManager.Size(p.ctx, filePath)
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if err != nil {
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log.Error("import wrapper: failed to get file size", zap.String("filePath", filePath), zap.Error(err))
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return rowBased, fmt.Errorf("failed to get file size of '%s', error:%w", filePath, err)
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}
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// empty file
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if size == 0 {
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log.Error("import wrapper: file size is zero", zap.String("filePath", filePath))
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return rowBased, fmt.Errorf("the file '%s' size is zero", filePath)
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}
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if size > MaxFileSize {
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log.Error("import wrapper: file size exceeds the maximum size", zap.String("filePath", filePath),
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zap.Int64("fileSize", size), zap.Int64("MaxFileSize", MaxFileSize))
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return rowBased, fmt.Errorf("the file '%s' size exceeds the maximum size: %d bytes", filePath, MaxFileSize)
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}
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totalSize += size
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}
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return rowBased, nil
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}
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// Import is the entry of import operation
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// filePath and rowBased are from ImportTask
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// if onlyValidate is true, this process only do validation, no data generated, flushFunc will not be called
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func (p *ImportWrapper) Import(filePaths []string, options ImportOptions) error {
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log.Info("import wrapper: begin import", zap.Any("filePaths", filePaths), zap.Any("options", options))
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// data restore function to import milvus native binlog files(for backup/restore tools)
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// the backup/restore tool provide two paths for a partition, the first path is binlog path, the second is deltalog path
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if options.IsBackup && p.isBinlogImport(filePaths) {
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return p.doBinlogImport(filePaths, options.TsStartPoint, options.TsEndPoint)
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}
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// normal logic for import general data files
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rowBased, err := p.fileValidation(filePaths)
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if err != nil {
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return err
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}
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tr := timerecord.NewTimeRecorder("Import task")
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if rowBased {
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// parse and consume row-based files
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// for row-based files, the JSONRowConsumer will generate autoid for primary key, and split rows into segments
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// according to shard number, so the flushFunc will be called in the JSONRowConsumer
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for i := 0; i < len(filePaths); i++ {
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filePath := filePaths[i]
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_, fileType := GetFileNameAndExt(filePath)
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log.Info("import wrapper: row-based file ", zap.Any("filePath", filePath), zap.Any("fileType", fileType))
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if fileType == JSONFileExt {
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err = p.parseRowBasedJSON(filePath, options.OnlyValidate)
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if err != nil {
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log.Error("import wrapper: failed to parse row-based json file", zap.Error(err), zap.String("filePath", filePath))
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return err
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}
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} // no need to check else, since the fileValidation() already do this
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// trigger gc after each file finished
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triggerGC()
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}
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} else {
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// parse and consume column-based files(currently support numpy)
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// for column-based files, the NumpyParser will generate autoid for primary key, and split rows into segments
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// according to shard number, so the flushFunc will be called in the NumpyParser
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flushFunc := func(fields map[storage.FieldID]storage.FieldData, shardID int) error {
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printFieldsDataInfo(fields, "import wrapper: prepare to flush binlog data", filePaths)
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return p.flushFunc(fields, shardID)
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}
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parser, err := NewNumpyParser(p.ctx, p.collectionSchema, p.rowIDAllocator, p.shardNum, SingleBlockSize,
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p.chunkManager, flushFunc, p.updateProgressPercent)
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if err != nil {
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return err
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}
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err = parser.Parse(filePaths)
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if err != nil {
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return err
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}
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p.importResult.AutoIds = append(p.importResult.AutoIds, parser.IDRange()...)
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// trigger after parse finished
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triggerGC()
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}
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return p.reportPersisted(p.reportImportAttempts, tr)
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}
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// reportPersisted notify the rootcoord to mark the task state to be ImportPersisted
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func (p *ImportWrapper) reportPersisted(reportAttempts uint, tr *timerecord.TimeRecorder) error {
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// force close all segments
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err := p.closeAllWorkingSegments()
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if err != nil {
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return err
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}
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if tr != nil {
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ts := tr.Elapse("persist finished").Seconds()
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p.importResult.Infos = append(p.importResult.Infos,
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&commonpb.KeyValuePair{Key: PersistTimeCost, Value: strconv.FormatFloat(ts, 'f', 2, 64)})
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}
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// report file process state
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p.importResult.State = commonpb.ImportState_ImportPersisted
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progressValue := strconv.Itoa(ProgressValueForPersist)
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UpdateKVInfo(&p.importResult.Infos, ProgressPercent, progressValue)
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log.Info("import wrapper: report import result", zap.Any("importResult", p.importResult))
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// persist state task is valuable, retry more times in case fail this task only because of network error
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reportErr := retry.Do(p.ctx, func() error {
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return p.reportFunc(p.importResult)
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}, retry.Attempts(reportAttempts))
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if reportErr != nil {
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log.Warn("import wrapper: fail to report import state to RootCoord", zap.Error(reportErr))
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return reportErr
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}
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return nil
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}
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// isBinlogImport is to judge whether it is binlog import operation
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// For internal usage by the restore tool: https://github.com/zilliztech/milvus-backup
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// This tool exports data from a milvus service, and call bulkload interface to import native data into another milvus service.
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// This tool provides two paths: one is insert log path of a partition,the other is delta log path of this partition.
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// This method checks the filePaths, if the file paths is exist and not a file, we say it is native import.
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func (p *ImportWrapper) isBinlogImport(filePaths []string) bool {
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// must contains the insert log path, and the delta log path is optional to be empty string
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if len(filePaths) != 2 {
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log.Info("import wrapper: paths count is not 2, not binlog import", zap.Int("len", len(filePaths)))
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return false
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}
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checkFunc := func(filePath string) bool {
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// contains file extension, is not a path
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_, fileType := GetFileNameAndExt(filePath)
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if len(fileType) != 0 {
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log.Info("import wrapper: not a path, not binlog import", zap.String("filePath", filePath), zap.String("fileType", fileType))
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return false
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}
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return true
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}
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// the first path is insert log path
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filePath := filePaths[0]
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if len(filePath) == 0 {
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log.Info("import wrapper: the first path is empty string, not binlog import")
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return false
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}
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if !checkFunc(filePath) {
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return false
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}
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// the second path is delta log path
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filePath = filePaths[1]
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if len(filePath) > 0 && !checkFunc(filePath) {
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return false
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}
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log.Info("import wrapper: do binlog import")
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return true
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}
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// doBinlogImport is the entry of binlog import operation
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func (p *ImportWrapper) doBinlogImport(filePaths []string, tsStartPoint uint64, tsEndPoint uint64) error {
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tr := timerecord.NewTimeRecorder("Import task")
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flushFunc := func(fields map[storage.FieldID]storage.FieldData, shardID int) error {
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printFieldsDataInfo(fields, "import wrapper: prepare to flush binlog data", filePaths)
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return p.flushFunc(fields, shardID)
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}
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parser, err := NewBinlogParser(p.ctx, p.collectionSchema, p.shardNum, SingleBlockSize, p.chunkManager, flushFunc,
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p.updateProgressPercent, tsStartPoint, tsEndPoint)
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if err != nil {
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return err
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}
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err = parser.Parse(filePaths)
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if err != nil {
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return err
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}
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return p.reportPersisted(p.reportImportAttempts, tr)
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}
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// parseRowBasedJSON is the entry of row-based json import operation
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func (p *ImportWrapper) parseRowBasedJSON(filePath string, onlyValidate bool) error {
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tr := timerecord.NewTimeRecorder("json row-based parser: " + filePath)
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// for minio storage, chunkManager will download file into local memory
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// for local storage, chunkManager open the file directly
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file, err := p.chunkManager.Reader(p.ctx, filePath)
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if err != nil {
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return err
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}
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defer file.Close()
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size, err := p.chunkManager.Size(p.ctx, filePath)
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if err != nil {
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return err
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}
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// parse file
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reader := bufio.NewReader(file)
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parser := NewJSONParser(p.ctx, p.collectionSchema, p.updateProgressPercent)
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// if only validate, we input a empty flushFunc so that the consumer do nothing but only validation.
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var flushFunc ImportFlushFunc
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if onlyValidate {
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flushFunc = func(fields map[storage.FieldID]storage.FieldData, shardID int) error {
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return nil
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}
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} else {
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flushFunc = func(fields map[storage.FieldID]storage.FieldData, shardID int) error {
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var filePaths = []string{filePath}
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printFieldsDataInfo(fields, "import wrapper: prepare to flush binlogs", filePaths)
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return p.flushFunc(fields, shardID)
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}
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}
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consumer, err := NewJSONRowConsumer(p.collectionSchema, p.rowIDAllocator, p.shardNum, SingleBlockSize, flushFunc)
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if err != nil {
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return err
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}
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err = parser.ParseRows(&IOReader{r: reader, fileSize: size}, consumer)
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if err != nil {
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return err
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}
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// for row-based files, auto-id is generated within JSONRowConsumer
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p.importResult.AutoIds = append(p.importResult.AutoIds, consumer.IDRange()...)
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tr.Elapse("parsed")
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return nil
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}
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// flushFunc is the callback function for parsers generate segment and save binlog files
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func (p *ImportWrapper) flushFunc(fields map[storage.FieldID]storage.FieldData, shardID int) error {
|
|
// if fields data is empty, do nothing
|
|
var rowNum int
|
|
memSize := 0
|
|
for _, field := range fields {
|
|
rowNum = field.RowNum()
|
|
memSize += field.GetMemorySize()
|
|
break
|
|
}
|
|
if rowNum <= 0 {
|
|
log.Warn("import wrapper: fields data is empty", zap.Int("shardID", shardID))
|
|
return nil
|
|
}
|
|
|
|
// if there is no segment for this shard, create a new one
|
|
// if the segment exists and its size almost exceed segmentSize, close it and create a new one
|
|
var segment *WorkingSegment
|
|
segment, ok := p.workingSegments[shardID]
|
|
if ok {
|
|
// the segment already exists, check its size, if the size exceeds(or almost) segmentSize, close the segment
|
|
if int64(segment.memSize)+int64(memSize) >= p.segmentSize {
|
|
err := p.closeWorkingSegment(segment)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
segment = nil
|
|
p.workingSegments[shardID] = nil
|
|
}
|
|
|
|
}
|
|
|
|
if segment == nil {
|
|
// create a new segment
|
|
segID, channelName, err := p.assignSegmentFunc(shardID)
|
|
if err != nil {
|
|
log.Error("import wrapper: failed to assign a new segment", zap.Error(err), zap.Int("shardID", shardID))
|
|
return fmt.Errorf("failed to assign a new segment for shard id %d, error: %w", shardID, err)
|
|
}
|
|
|
|
segment = &WorkingSegment{
|
|
segmentID: segID,
|
|
shardID: shardID,
|
|
targetChName: channelName,
|
|
rowCount: int64(0),
|
|
memSize: 0,
|
|
fieldsInsert: make([]*datapb.FieldBinlog, 0),
|
|
fieldsStats: make([]*datapb.FieldBinlog, 0),
|
|
}
|
|
p.workingSegments[shardID] = segment
|
|
}
|
|
|
|
// save binlogs
|
|
fieldsInsert, fieldsStats, err := p.createBinlogsFunc(fields, segment.segmentID)
|
|
if err != nil {
|
|
log.Error("import wrapper: failed to save binlogs", zap.Error(err), zap.Int("shardID", shardID),
|
|
zap.Int64("segmentID", segment.segmentID), zap.String("targetChannel", segment.targetChName))
|
|
return fmt.Errorf("failed to save binlogs, shard id %d, segment id %d, channel '%s', error: %w",
|
|
shardID, segment.segmentID, segment.targetChName, err)
|
|
}
|
|
|
|
segment.fieldsInsert = append(segment.fieldsInsert, fieldsInsert...)
|
|
segment.fieldsStats = append(segment.fieldsStats, fieldsStats...)
|
|
segment.rowCount += int64(rowNum)
|
|
segment.memSize += memSize
|
|
|
|
// report working progress percent value to rootcoord
|
|
// if failed to report, ignore the error, the percent value might be improper but the task can be succeed
|
|
progressValue := strconv.Itoa(int(p.progressPercent))
|
|
UpdateKVInfo(&p.importResult.Infos, ProgressPercent, progressValue)
|
|
reportErr := retry.Do(p.ctx, func() error {
|
|
return p.reportFunc(p.importResult)
|
|
}, retry.Attempts(p.reportImportAttempts))
|
|
if reportErr != nil {
|
|
log.Warn("import wrapper: fail to report working progress percent value to RootCoord", zap.Error(reportErr))
|
|
}
|
|
|
|
return nil
|
|
}
|
|
|
|
// closeWorkingSegment marks a segment to be sealed
|
|
func (p *ImportWrapper) closeWorkingSegment(segment *WorkingSegment) error {
|
|
log.Info("import wrapper: adding segment to the correct DataNode flow graph and saving binlog paths",
|
|
zap.Int("shardID", segment.shardID),
|
|
zap.Int64("segmentID", segment.segmentID),
|
|
zap.String("targetChannel", segment.targetChName),
|
|
zap.Int64("rowCount", segment.rowCount),
|
|
zap.Int("insertLogCount", len(segment.fieldsInsert)),
|
|
zap.Int("statsLogCount", len(segment.fieldsStats)))
|
|
|
|
err := p.saveSegmentFunc(segment.fieldsInsert, segment.fieldsStats, segment.segmentID, segment.targetChName, segment.rowCount)
|
|
if err != nil {
|
|
log.Error("import wrapper: failed to seal segment",
|
|
zap.Error(err),
|
|
zap.Int("shardID", segment.shardID),
|
|
zap.Int64("segmentID", segment.segmentID),
|
|
zap.String("targetChannel", segment.targetChName))
|
|
return fmt.Errorf("failed to seal segment, shard id %d, segment id %d, channel '%s', error: %w",
|
|
segment.shardID, segment.segmentID, segment.targetChName, err)
|
|
}
|
|
|
|
return nil
|
|
}
|
|
|
|
// closeAllWorkingSegments mark all segments to be sealed at the end of import operation
|
|
func (p *ImportWrapper) closeAllWorkingSegments() error {
|
|
for _, segment := range p.workingSegments {
|
|
err := p.closeWorkingSegment(segment)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
}
|
|
p.workingSegments = make(map[int]*WorkingSegment)
|
|
|
|
return nil
|
|
}
|
|
|
|
func (p *ImportWrapper) updateProgressPercent(percent int64) {
|
|
// ignore illegal percent value
|
|
if percent < 0 || percent > 100 {
|
|
return
|
|
}
|
|
p.progressPercent = percent
|
|
}
|