milvus/internal/util/importutilv2/parquet/field_reader.go
Hao Tan 67c4340565
feat: Geospatial Data Type and GIS Function Support for milvus server (#35990)
issue:https://github.com/milvus-io/milvus/issues/27576

# Main Goals
1. Create and describe collections with geospatial fields, enabling both
client and server to recognize and process geo fields.
2. Insert geospatial data as payload values in the insert binlog, and
print the values for verification.
3. Load segments containing geospatial data into memory.
4. Ensure query outputs can display geospatial data.
5. Support filtering on GIS functions for geospatial columns.

# Solution
1. **Add Type**: Modify the Milvus core by adding a Geospatial type in
both the C++ and Go code layers, defining the Geospatial data structure
and the corresponding interfaces.
2. **Dependency Libraries**: Introduce necessary geospatial data
processing libraries. In the C++ source code, use Conan package
management to include the GDAL library. In the Go source code, add the
go-geom library to the go.mod file.
3. **Protocol Interface**: Revise the Milvus protocol to provide
mechanisms for Geospatial message serialization and deserialization.
4. **Data Pipeline**: Facilitate interaction between the client and
proxy using the WKT format for geospatial data. The proxy will convert
all data into WKB format for downstream processing, providing column
data interfaces, segment encapsulation, segment loading, payload
writing, and cache block management.
5. **Query Operators**: Implement simple display and support for filter
queries. Initially, focus on filtering based on spatial relationships
for a single column of geospatial literal values, providing parsing and
execution for query expressions.
6. **Client Modification**: Enable the client to handle user input for
geospatial data and facilitate end-to-end testing.Check the modification
in pymilvus.

---------

Signed-off-by: tasty-gumi <1021989072@qq.com>
2024-10-31 20:58:20 +08:00

1431 lines
42 KiB
Go

// Licensed to the LF AI & Data foundation under one
// or more contributor license agreements. See the NOTICE file
// distributed with this work for additional information
// regarding copyright ownership. The ASF licenses this file
// to you under the Apache License, Version 2.0 (the
// "License"); you may not use this file except in compliance
// with the License. You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.
package parquet
import (
"context"
"encoding/json"
"fmt"
"github.com/apache/arrow/go/v12/arrow"
"github.com/apache/arrow/go/v12/arrow/array"
"github.com/apache/arrow/go/v12/parquet/pqarrow"
"github.com/samber/lo"
"golang.org/x/exp/constraints"
"github.com/milvus-io/milvus-proto/go-api/v2/schemapb"
"github.com/milvus-io/milvus/internal/storage"
"github.com/milvus-io/milvus/internal/util/importutilv2/common"
"github.com/milvus-io/milvus/internal/util/nullutil"
"github.com/milvus-io/milvus/pkg/util/merr"
"github.com/milvus-io/milvus/pkg/util/parameterutil"
"github.com/milvus-io/milvus/pkg/util/typeutil"
)
type FieldReader struct {
columnIndex int
columnReader *pqarrow.ColumnReader
dim int
field *schemapb.FieldSchema
}
func NewFieldReader(ctx context.Context, reader *pqarrow.FileReader, columnIndex int, field *schemapb.FieldSchema) (*FieldReader, error) {
columnReader, err := reader.GetColumn(ctx, columnIndex)
if err != nil {
return nil, err
}
var dim int64 = 1
if typeutil.IsVectorType(field.GetDataType()) && !typeutil.IsSparseFloatVectorType(field.GetDataType()) {
dim, err = typeutil.GetDim(field)
if err != nil {
return nil, err
}
}
cr := &FieldReader{
columnIndex: columnIndex,
columnReader: columnReader,
dim: int(dim),
field: field,
}
return cr, nil
}
func (c *FieldReader) Next(count int64) (any, any, error) {
switch c.field.GetDataType() {
case schemapb.DataType_Bool:
if c.field.GetNullable() || c.field.GetDefaultValue() != nil {
return ReadNullableBoolData(c, count)
}
data, err := ReadBoolData(c, count)
return data, nil, err
case schemapb.DataType_Int8:
if c.field.GetNullable() || c.field.GetDefaultValue() != nil {
return ReadNullableIntegerOrFloatData[int8](c, count)
}
data, err := ReadIntegerOrFloatData[int8](c, count)
return data, nil, err
case schemapb.DataType_Int16:
if c.field.GetNullable() || c.field.GetDefaultValue() != nil {
return ReadNullableIntegerOrFloatData[int16](c, count)
}
data, err := ReadIntegerOrFloatData[int16](c, count)
return data, nil, err
case schemapb.DataType_Int32:
if c.field.GetNullable() || c.field.GetDefaultValue() != nil {
return ReadNullableIntegerOrFloatData[int32](c, count)
}
data, err := ReadIntegerOrFloatData[int32](c, count)
return data, nil, err
case schemapb.DataType_Int64:
if c.field.GetNullable() || c.field.GetDefaultValue() != nil {
return ReadNullableIntegerOrFloatData[int64](c, count)
}
data, err := ReadIntegerOrFloatData[int64](c, count)
return data, nil, err
case schemapb.DataType_Float:
if c.field.GetNullable() || c.field.GetDefaultValue() != nil {
data, validData, err := ReadNullableIntegerOrFloatData[float32](c, count)
if err != nil {
return nil, nil, err
}
if data == nil {
return nil, nil, nil
}
return data, validData, typeutil.VerifyFloats32(data.([]float32))
}
data, err := ReadIntegerOrFloatData[float32](c, count)
if err != nil {
return nil, nil, err
}
if data == nil {
return nil, nil, nil
}
return data, nil, typeutil.VerifyFloats32(data.([]float32))
case schemapb.DataType_Double:
if c.field.GetNullable() || c.field.GetDefaultValue() != nil {
data, validData, err := ReadNullableIntegerOrFloatData[float64](c, count)
if err != nil {
return nil, nil, err
}
if data == nil {
return nil, nil, nil
}
return data, validData, typeutil.VerifyFloats64(data.([]float64))
}
data, err := ReadIntegerOrFloatData[float64](c, count)
if err != nil {
return nil, nil, err
}
if data == nil {
return nil, nil, nil
}
return data, nil, typeutil.VerifyFloats64(data.([]float64))
case schemapb.DataType_VarChar, schemapb.DataType_String:
if c.field.GetNullable() || c.field.GetDefaultValue() != nil {
return ReadNullableVarcharData(c, count)
}
data, err := ReadVarcharData(c, count)
return data, nil, err
case schemapb.DataType_JSON:
// json has not support default_value
if c.field.GetNullable() {
return ReadNullableJSONData(c, count)
}
data, err := ReadJSONData(c, count)
return data, nil, err
case schemapb.DataType_Geometry:
if c.field.GetNullable() {
return ReadNullableGeometryData(c, count)
}
data, err := ReadGeometryData(c, count)
return data, nil, err
case schemapb.DataType_BinaryVector, schemapb.DataType_Float16Vector, schemapb.DataType_BFloat16Vector:
// vector not support default_value
if c.field.GetNullable() {
return nil, nil, merr.WrapErrParameterInvalidMsg("not support nullable in vector")
}
data, err := ReadBinaryData(c, count)
return data, nil, err
case schemapb.DataType_FloatVector:
if c.field.GetNullable() {
return nil, nil, merr.WrapErrParameterInvalidMsg("not support nullable in vector")
}
arrayData, err := ReadIntegerOrFloatArrayData[float32](c, count)
if err != nil {
return nil, nil, err
}
if arrayData == nil {
return nil, nil, nil
}
vectors := lo.Flatten(arrayData.([][]float32))
return vectors, nil, nil
case schemapb.DataType_SparseFloatVector:
if c.field.GetNullable() {
return nil, nil, merr.WrapErrParameterInvalidMsg("not support nullable in vector")
}
data, err := ReadSparseFloatVectorData(c, count)
return data, nil, err
case schemapb.DataType_Array:
// array has not support default_value
if c.field.GetNullable() {
return ReadNullableArrayData(c, count)
}
data, err := ReadArrayData(c, count)
return data, nil, err
default:
return nil, nil, merr.WrapErrImportFailed(fmt.Sprintf("unsupported data type '%s' for field '%s'",
c.field.GetDataType().String(), c.field.GetName()))
}
}
func (c *FieldReader) Close() {}
func ReadBoolData(pcr *FieldReader, count int64) (any, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, err
}
data := make([]bool, 0, count)
for _, chunk := range chunked.Chunks() {
dataNums := chunk.Data().Len()
boolReader, ok := chunk.(*array.Boolean)
if boolReader.NullN() > 0 {
return nil, merr.WrapErrParameterInvalidMsg("not nullable, but has null value")
}
if !ok {
return nil, WrapTypeErr("bool", chunk.DataType().Name(), pcr.field)
}
for i := 0; i < dataNums; i++ {
data = append(data, boolReader.Value(i))
}
}
if len(data) == 0 {
return nil, nil
}
return data, nil
}
func fillWithDefaultValueImpl[T any](array []T, value T, validData []bool, field *schemapb.FieldSchema) (any, []bool, error) {
rowNum := len(validData)
for i, v := range validData {
if !v {
array[i] = value
}
}
if !typeutil.IsVectorType(field.GetDataType()) {
if field.GetNullable() {
for i := range validData {
validData[i] = true
}
} else {
validData = []bool{}
}
}
err := nullutil.CheckValidData(validData, field, rowNum)
if err != nil {
return nil, nil, err
}
return array, validData, nil
}
func ReadNullableBoolData(pcr *FieldReader, count int64) (any, []bool, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, nil, err
}
data := make([]bool, 0, count)
validData := make([]bool, 0, count)
for _, chunk := range chunked.Chunks() {
dataNums := chunk.Data().Len()
boolReader, ok := chunk.(*array.Boolean)
if !ok {
// the chunk type may be *array.Null if the data in chunk is all null
_, ok := chunk.(*array.Null)
if !ok {
return nil, nil, WrapTypeErr("bool|null", chunk.DataType().Name(), pcr.field)
}
validData = append(validData, make([]bool, dataNums)...)
data = append(data, make([]bool, dataNums)...)
} else {
validData = append(validData, bytesToBoolArray(dataNums, boolReader.NullBitmapBytes())...)
for i := 0; i < dataNums; i++ {
data = append(data, boolReader.Value(i))
}
}
}
if len(data) != len(validData) {
return nil, nil, merr.WrapErrParameterInvalid(len(data), len(validData), "length of data is not equal to length of valid_data")
}
if len(data) == 0 {
return nil, nil, nil
}
if pcr.field.GetDefaultValue() != nil {
defaultValue := pcr.field.GetDefaultValue().GetBoolData()
return fillWithDefaultValueImpl(data, defaultValue, validData, pcr.field)
}
return data, validData, nil
}
func ReadIntegerOrFloatData[T constraints.Integer | constraints.Float](pcr *FieldReader, count int64) (any, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, err
}
data := make([]T, 0, count)
for _, chunk := range chunked.Chunks() {
dataNums := chunk.Data().Len()
switch chunk.DataType().ID() {
case arrow.INT8:
int8Reader := chunk.(*array.Int8)
if int8Reader.NullN() > 0 {
return nil, merr.WrapErrParameterInvalidMsg("not nullable, but has null value")
}
for i := 0; i < dataNums; i++ {
data = append(data, T(int8Reader.Value(i)))
}
case arrow.INT16:
int16Reader := chunk.(*array.Int16)
if int16Reader.NullN() > 0 {
return nil, merr.WrapErrParameterInvalidMsg("not nullable, but has null value")
}
for i := 0; i < dataNums; i++ {
data = append(data, T(int16Reader.Value(i)))
}
case arrow.INT32:
int32Reader := chunk.(*array.Int32)
if int32Reader.NullN() > 0 {
return nil, merr.WrapErrParameterInvalidMsg("not nullable, but has null value")
}
for i := 0; i < dataNums; i++ {
data = append(data, T(int32Reader.Value(i)))
}
case arrow.INT64:
int64Reader := chunk.(*array.Int64)
if int64Reader.NullN() > 0 {
return nil, merr.WrapErrParameterInvalidMsg("not nullable, but has null value")
}
for i := 0; i < dataNums; i++ {
data = append(data, T(int64Reader.Value(i)))
}
case arrow.FLOAT32:
float32Reader := chunk.(*array.Float32)
if float32Reader.NullN() > 0 {
return nil, merr.WrapErrParameterInvalidMsg("not nullable, but has null value")
}
for i := 0; i < dataNums; i++ {
data = append(data, T(float32Reader.Value(i)))
}
case arrow.FLOAT64:
float64Reader := chunk.(*array.Float64)
if float64Reader.NullN() > 0 {
return nil, merr.WrapErrParameterInvalidMsg("not nullable, but has null value")
}
for i := 0; i < dataNums; i++ {
data = append(data, T(float64Reader.Value(i)))
}
default:
return nil, WrapTypeErr("integer|float", chunk.DataType().Name(), pcr.field)
}
}
if len(data) == 0 {
return nil, nil
}
return data, nil
}
func ReadNullableIntegerOrFloatData[T constraints.Integer | constraints.Float](pcr *FieldReader, count int64) (any, []bool, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, nil, err
}
data := make([]T, 0, count)
validData := make([]bool, 0, count)
for _, chunk := range chunked.Chunks() {
dataNums := chunk.Data().Len()
switch chunk.DataType().ID() {
case arrow.INT8:
int8Reader := chunk.(*array.Int8)
validData = append(validData, bytesToBoolArray(dataNums, int8Reader.NullBitmapBytes())...)
for i := 0; i < dataNums; i++ {
data = append(data, T(int8Reader.Value(i)))
}
case arrow.INT16:
int16Reader := chunk.(*array.Int16)
validData = append(validData, bytesToBoolArray(dataNums, int16Reader.NullBitmapBytes())...)
for i := 0; i < dataNums; i++ {
data = append(data, T(int16Reader.Value(i)))
}
case arrow.INT32:
int32Reader := chunk.(*array.Int32)
validData = append(validData, bytesToBoolArray(dataNums, int32Reader.NullBitmapBytes())...)
for i := 0; i < dataNums; i++ {
data = append(data, T(int32Reader.Value(i)))
}
case arrow.INT64:
int64Reader := chunk.(*array.Int64)
validData = append(validData, bytesToBoolArray(dataNums, int64Reader.NullBitmapBytes())...)
for i := 0; i < dataNums; i++ {
data = append(data, T(int64Reader.Value(i)))
}
case arrow.FLOAT32:
float32Reader := chunk.(*array.Float32)
validData = append(validData, bytesToBoolArray(dataNums, float32Reader.NullBitmapBytes())...)
for i := 0; i < dataNums; i++ {
data = append(data, T(float32Reader.Value(i)))
}
case arrow.FLOAT64:
float64Reader := chunk.(*array.Float64)
validData = append(validData, bytesToBoolArray(dataNums, float64Reader.NullBitmapBytes())...)
for i := 0; i < dataNums; i++ {
data = append(data, T(float64Reader.Value(i)))
}
case arrow.NULL:
// the chunk type may be *array.Null if the data in chunk is all null
validData = append(validData, make([]bool, dataNums)...)
data = append(data, make([]T, dataNums)...)
default:
return nil, nil, WrapTypeErr("integer|float|null", chunk.DataType().Name(), pcr.field)
}
}
if len(data) != len(validData) {
return nil, nil, merr.WrapErrParameterInvalid(len(data), len(validData), "length of data is not equal to length of valid_data")
}
if len(data) == 0 {
return nil, nil, nil
}
if pcr.field.GetDefaultValue() != nil {
defaultValue, err := nullutil.GetDefaultValue(pcr.field)
if err != nil {
// won't happen
return nil, nil, err
}
return fillWithDefaultValueImpl(data, defaultValue.(T), validData, pcr.field)
}
return data, validData, nil
}
func ReadStringData(pcr *FieldReader, count int64) (any, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, err
}
data := make([]string, 0, count)
for _, chunk := range chunked.Chunks() {
dataNums := chunk.Data().Len()
stringReader, ok := chunk.(*array.String)
if stringReader.NullN() > 0 {
return nil, merr.WrapErrParameterInvalidMsg("not nullable, but has null value")
}
if !ok {
return nil, WrapTypeErr("string", chunk.DataType().Name(), pcr.field)
}
for i := 0; i < dataNums; i++ {
data = append(data, stringReader.Value(i))
}
}
if len(data) == 0 {
return nil, nil
}
return data, nil
}
func ReadNullableStringData(pcr *FieldReader, count int64) (any, []bool, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, nil, err
}
data := make([]string, 0, count)
validData := make([]bool, 0, count)
for _, chunk := range chunked.Chunks() {
dataNums := chunk.Data().Len()
stringReader, ok := chunk.(*array.String)
if !ok {
// the chunk type may be *array.Null if the data in chunk is all null
_, ok := chunk.(*array.Null)
if !ok {
return nil, nil, WrapTypeErr("string|null", chunk.DataType().Name(), pcr.field)
}
validData = append(validData, make([]bool, dataNums)...)
data = append(data, make([]string, dataNums)...)
} else {
validData = append(validData, bytesToBoolArray(dataNums, stringReader.NullBitmapBytes())...)
for i := 0; i < dataNums; i++ {
if stringReader.IsNull(i) {
data = append(data, "")
continue
}
data = append(data, stringReader.ValueStr(i))
}
}
}
if len(data) != len(validData) {
return nil, nil, merr.WrapErrParameterInvalid(len(data), len(validData), "length of data is not equal to length of valid_data")
}
if len(data) == 0 {
return nil, nil, nil
}
return data, validData, nil
}
func ReadVarcharData(pcr *FieldReader, count int64) (any, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, err
}
data := make([]string, 0, count)
maxLength, err := parameterutil.GetMaxLength(pcr.field)
if err != nil {
return nil, err
}
for _, chunk := range chunked.Chunks() {
dataNums := chunk.Data().Len()
stringReader, ok := chunk.(*array.String)
if stringReader.NullN() > 0 {
return nil, merr.WrapErrParameterInvalidMsg("not nullable, but has null value")
}
if !ok {
return nil, WrapTypeErr("string", chunk.DataType().Name(), pcr.field)
}
for i := 0; i < dataNums; i++ {
if err = common.CheckVarcharLength(stringReader.Value(i), maxLength); err != nil {
return nil, err
}
data = append(data, stringReader.Value(i))
}
}
if len(data) == 0 {
return nil, nil
}
return data, nil
}
func ReadNullableVarcharData(pcr *FieldReader, count int64) (any, []bool, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, nil, err
}
data := make([]string, 0, count)
maxLength, err := parameterutil.GetMaxLength(pcr.field)
if err != nil {
return nil, nil, err
}
validData := make([]bool, 0, count)
for _, chunk := range chunked.Chunks() {
dataNums := chunk.Data().Len()
stringReader, ok := chunk.(*array.String)
if !ok {
// the chunk type may be *array.Null if the data in chunk is all null
_, ok := chunk.(*array.Null)
if !ok {
return nil, nil, WrapTypeErr("string|null", chunk.DataType().Name(), pcr.field)
}
validData = append(validData, make([]bool, dataNums)...)
data = append(data, make([]string, dataNums)...)
} else {
validData = append(validData, bytesToBoolArray(dataNums, stringReader.NullBitmapBytes())...)
for i := 0; i < dataNums; i++ {
if stringReader.IsNull(i) {
data = append(data, "")
continue
}
if err = common.CheckVarcharLength(stringReader.Value(i), maxLength); err != nil {
return nil, nil, err
}
data = append(data, stringReader.ValueStr(i))
}
}
}
if len(data) != len(validData) {
return nil, nil, merr.WrapErrParameterInvalid(len(data), len(validData), "length of data is not equal to length of valid_data")
}
if len(data) == 0 {
return nil, nil, nil
}
if pcr.field.GetDefaultValue() != nil {
defaultValue := pcr.field.GetDefaultValue().GetStringData()
return fillWithDefaultValueImpl(data, defaultValue, validData, pcr.field)
}
return data, validData, nil
}
func ReadJSONData(pcr *FieldReader, count int64) (any, error) {
// JSON field read data from string array Parquet
data, err := ReadStringData(pcr, count)
if err != nil {
return nil, err
}
if data == nil {
return nil, nil
}
byteArr := make([][]byte, 0)
for _, str := range data.([]string) {
var dummy interface{}
err = json.Unmarshal([]byte(str), &dummy)
if err != nil {
return nil, err
}
if pcr.field.GetIsDynamic() {
var dummy2 map[string]interface{}
err = json.Unmarshal([]byte(str), &dummy2)
if err != nil {
return nil, err
}
}
byteArr = append(byteArr, []byte(str))
}
return byteArr, nil
}
func ReadNullableJSONData(pcr *FieldReader, count int64) (any, []bool, error) {
// JSON field read data from string array Parquet
data, validData, err := ReadNullableStringData(pcr, count)
if err != nil {
return nil, nil, err
}
if data == nil {
return nil, nil, nil
}
byteArr := make([][]byte, 0)
for i, str := range data.([]string) {
if !validData[i] {
byteArr = append(byteArr, []byte(nil))
continue
}
var dummy interface{}
err = json.Unmarshal([]byte(str), &dummy)
if err != nil {
return nil, nil, err
}
if pcr.field.GetIsDynamic() {
var dummy2 map[string]interface{}
err = json.Unmarshal([]byte(str), &dummy2)
if err != nil {
return nil, nil, err
}
}
byteArr = append(byteArr, []byte(str))
}
return byteArr, validData, nil
}
func ReadNullableGeometryData(pcr *FieldReader, count int64) (any, []bool, error) {
// Geometry field read data from string array Parquet
data, validData, err := ReadNullableStringData(pcr, count)
if err != nil {
return nil, nil, err
}
if data == nil {
return nil, nil, nil
}
byteArr := make([][]byte, 0)
for i, str := range data.([]string) {
if !validData[i] {
byteArr = append(byteArr, []byte(nil))
continue
}
byteArr = append(byteArr, []byte(str))
}
return byteArr, validData, nil
}
func ReadGeometryData(pcr *FieldReader, count int64) (any, error) {
// Geometry field read data from string array Parquet
data, err := ReadStringData(pcr, count)
if err != nil {
return nil, err
}
if data == nil {
return nil, nil
}
byteArr := make([][]byte, 0)
for _, str := range data.([]string) {
byteArr = append(byteArr, []byte(str))
}
return byteArr, nil
}
func ReadBinaryData(pcr *FieldReader, count int64) (any, error) {
dataType := pcr.field.GetDataType()
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, err
}
data := make([]byte, 0, count)
for _, chunk := range chunked.Chunks() {
rows := chunk.Data().Len()
switch chunk.DataType().ID() {
case arrow.BINARY:
binaryReader := chunk.(*array.Binary)
for i := 0; i < rows; i++ {
data = append(data, binaryReader.Value(i)...)
}
case arrow.LIST:
listReader := chunk.(*array.List)
if err = checkVectorAligned(listReader.Offsets(), pcr.dim, dataType); err != nil {
return nil, merr.WrapErrImportFailed(fmt.Sprintf("length of vector is not aligned: %s, data type: %s", err.Error(), dataType.String()))
}
uint8Reader, ok := listReader.ListValues().(*array.Uint8)
if !ok {
return nil, WrapTypeErr("binary", listReader.ListValues().DataType().Name(), pcr.field)
}
data = append(data, uint8Reader.Uint8Values()...)
default:
return nil, WrapTypeErr("binary", chunk.DataType().Name(), pcr.field)
}
}
if len(data) == 0 {
return nil, nil
}
return data, nil
}
func ReadSparseFloatVectorData(pcr *FieldReader, count int64) (any, error) {
data, err := ReadStringData(pcr, count)
if err != nil {
return nil, err
}
if data == nil {
return nil, nil
}
byteArr := make([][]byte, 0, count)
maxDim := uint32(0)
for _, str := range data.([]string) {
rowVec, err := typeutil.CreateSparseFloatRowFromJSON([]byte(str))
if err != nil {
return nil, merr.WrapErrImportFailed(fmt.Sprintf("Invalid JSON string for SparseFloatVector: '%s', err = %v", str, err))
}
byteArr = append(byteArr, rowVec)
elemCount := len(rowVec) / 8
maxIdx := typeutil.SparseFloatRowIndexAt(rowVec, elemCount-1)
if maxIdx+1 > maxDim {
maxDim = maxIdx + 1
}
}
return &storage.SparseFloatVectorFieldData{
SparseFloatArray: schemapb.SparseFloatArray{
Dim: int64(maxDim),
Contents: byteArr,
},
}, nil
}
func checkVectorAlignWithDim(offsets []int32, dim int32) error {
for i := 1; i < len(offsets); i++ {
if offsets[i]-offsets[i-1] != dim {
return fmt.Errorf("expected %d but got %d", dim, offsets[i]-offsets[i-1])
}
}
return nil
}
func checkVectorAligned(offsets []int32, dim int, dataType schemapb.DataType) error {
if len(offsets) < 1 {
return fmt.Errorf("empty offsets")
}
switch dataType {
case schemapb.DataType_BinaryVector:
return checkVectorAlignWithDim(offsets, int32(dim/8))
case schemapb.DataType_FloatVector:
return checkVectorAlignWithDim(offsets, int32(dim))
case schemapb.DataType_Float16Vector, schemapb.DataType_BFloat16Vector:
return checkVectorAlignWithDim(offsets, int32(dim*2))
case schemapb.DataType_SparseFloatVector:
// JSON format, skip alignment check
return nil
default:
return fmt.Errorf("unexpected vector data type %s", dataType.String())
}
}
func ReadBoolArrayData(pcr *FieldReader, count int64) (any, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, err
}
data := make([][]bool, 0, count)
for _, chunk := range chunked.Chunks() {
listReader, ok := chunk.(*array.List)
if !ok {
return nil, WrapTypeErr("list", chunk.DataType().Name(), pcr.field)
}
boolReader, ok := listReader.ListValues().(*array.Boolean)
if !ok {
return nil, WrapTypeErr("boolArray", chunk.DataType().Name(), pcr.field)
}
offsets := listReader.Offsets()
for i := 1; i < len(offsets); i++ {
start, end := offsets[i-1], offsets[i]
elementData := make([]bool, 0, end-start)
for j := start; j < end; j++ {
elementData = append(elementData, boolReader.Value(int(j)))
}
data = append(data, elementData)
}
}
if len(data) == 0 {
return nil, nil
}
return data, nil
}
func ReadNullableBoolArrayData(pcr *FieldReader, count int64) (any, []bool, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, nil, err
}
data := make([][]bool, 0, count)
validData := make([]bool, 0, count)
for _, chunk := range chunked.Chunks() {
listReader, ok := chunk.(*array.List)
if !ok {
// the chunk type may be *array.Null if the data in chunk is all null
_, ok := chunk.(*array.Null)
if !ok {
return nil, nil, WrapTypeErr("list|null", chunk.DataType().Name(), pcr.field)
}
dataNums := chunk.Data().Len()
validData = append(validData, make([]bool, dataNums)...)
data = append(data, make([][]bool, dataNums)...)
} else {
boolReader, ok := listReader.ListValues().(*array.Boolean)
if !ok {
return nil, nil, WrapTypeErr("boolArray", chunk.DataType().Name(), pcr.field)
}
offsets := listReader.Offsets()
for i := 1; i < len(offsets); i++ {
start, end := offsets[i-1], offsets[i]
elementData := make([]bool, 0, end-start)
for j := start; j < end; j++ {
elementData = append(elementData, boolReader.Value(int(j)))
}
data = append(data, elementData)
elementDataValid := true
if start == end {
elementDataValid = false
}
validData = append(validData, elementDataValid)
}
}
}
if len(data) != len(validData) {
return nil, nil, merr.WrapErrParameterInvalid(len(data), len(validData), "length of data is not equal to length of valid_data")
}
if len(data) == 0 {
return nil, nil, nil
}
return data, validData, nil
}
func ReadIntegerOrFloatArrayData[T constraints.Integer | constraints.Float](pcr *FieldReader, count int64) (any, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, err
}
data := make([][]T, 0, count)
getDataFunc := func(offsets []int32, getValue func(int) T) {
for i := 1; i < len(offsets); i++ {
start, end := offsets[i-1], offsets[i]
elementData := make([]T, 0, end-start)
for j := start; j < end; j++ {
elementData = append(elementData, getValue(int(j)))
}
data = append(data, elementData)
}
}
for _, chunk := range chunked.Chunks() {
listReader, ok := chunk.(*array.List)
if !ok {
return nil, WrapTypeErr("list", chunk.DataType().Name(), pcr.field)
}
offsets := listReader.Offsets()
dataType := pcr.field.GetDataType()
if typeutil.IsVectorType(dataType) {
if err = checkVectorAligned(offsets, pcr.dim, dataType); err != nil {
return nil, merr.WrapErrImportFailed(fmt.Sprintf("length of vector is not aligned: %s, data type: %s", err.Error(), dataType.String()))
}
}
valueReader := listReader.ListValues()
switch valueReader.DataType().ID() {
case arrow.INT8:
int8Reader := valueReader.(*array.Int8)
getDataFunc(offsets, func(i int) T {
return T(int8Reader.Value(i))
})
case arrow.INT16:
int16Reader := valueReader.(*array.Int16)
getDataFunc(offsets, func(i int) T {
return T(int16Reader.Value(i))
})
case arrow.INT32:
int32Reader := valueReader.(*array.Int32)
getDataFunc(offsets, func(i int) T {
return T(int32Reader.Value(i))
})
case arrow.INT64:
int64Reader := valueReader.(*array.Int64)
getDataFunc(offsets, func(i int) T {
return T(int64Reader.Value(i))
})
case arrow.FLOAT32:
float32Reader := valueReader.(*array.Float32)
getDataFunc(offsets, func(i int) T {
return T(float32Reader.Value(i))
})
case arrow.FLOAT64:
float64Reader := valueReader.(*array.Float64)
getDataFunc(offsets, func(i int) T {
return T(float64Reader.Value(i))
})
default:
return nil, WrapTypeErr("integerArray|floatArray", chunk.DataType().Name(), pcr.field)
}
}
if len(data) == 0 {
return nil, nil
}
return data, nil
}
func ReadNullableIntegerOrFloatArrayData[T constraints.Integer | constraints.Float](pcr *FieldReader, count int64) (any, []bool, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, nil, err
}
data := make([][]T, 0, count)
validData := make([]bool, 0, count)
getDataFunc := func(offsets []int32, getValue func(int) T) {
for i := 1; i < len(offsets); i++ {
start, end := offsets[i-1], offsets[i]
elementData := make([]T, 0, end-start)
for j := start; j < end; j++ {
elementData = append(elementData, getValue(int(j)))
}
data = append(data, elementData)
elementDataValid := true
if start == end {
elementDataValid = false
}
validData = append(validData, elementDataValid)
}
}
for _, chunk := range chunked.Chunks() {
listReader, ok := chunk.(*array.List)
if !ok {
// the chunk type may be *array.Null if the data in chunk is all null
_, ok := chunk.(*array.Null)
if !ok {
return nil, nil, WrapTypeErr("list|null", chunk.DataType().Name(), pcr.field)
}
dataNums := chunk.Data().Len()
validData = append(validData, make([]bool, dataNums)...)
data = append(data, make([][]T, dataNums)...)
} else {
offsets := listReader.Offsets()
dataType := pcr.field.GetDataType()
if typeutil.IsVectorType(dataType) {
if err = checkVectorAligned(offsets, pcr.dim, dataType); err != nil {
return nil, nil, merr.WrapErrImportFailed(fmt.Sprintf("length of vector is not aligned: %s, data type: %s", err.Error(), dataType.String()))
}
}
valueReader := listReader.ListValues()
switch valueReader.DataType().ID() {
case arrow.INT8:
int8Reader := valueReader.(*array.Int8)
getDataFunc(offsets, func(i int) T {
return T(int8Reader.Value(i))
})
case arrow.INT16:
int16Reader := valueReader.(*array.Int16)
getDataFunc(offsets, func(i int) T {
return T(int16Reader.Value(i))
})
case arrow.INT32:
int32Reader := valueReader.(*array.Int32)
getDataFunc(offsets, func(i int) T {
return T(int32Reader.Value(i))
})
case arrow.INT64:
int64Reader := valueReader.(*array.Int64)
getDataFunc(offsets, func(i int) T {
return T(int64Reader.Value(i))
})
case arrow.FLOAT32:
float32Reader := valueReader.(*array.Float32)
getDataFunc(offsets, func(i int) T {
return T(float32Reader.Value(i))
})
case arrow.FLOAT64:
float64Reader := valueReader.(*array.Float64)
getDataFunc(offsets, func(i int) T {
return T(float64Reader.Value(i))
})
default:
return nil, nil, WrapTypeErr("integerArray|floatArray", chunk.DataType().Name(), pcr.field)
}
}
}
if len(data) != len(validData) {
return nil, nil, merr.WrapErrParameterInvalid(len(data), len(validData), "length of data is not equal to length of valid_data")
}
if len(data) == 0 {
return nil, nil, nil
}
return data, validData, nil
}
func ReadStringArrayData(pcr *FieldReader, count int64) (any, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, err
}
data := make([][]string, 0, count)
for _, chunk := range chunked.Chunks() {
listReader, ok := chunk.(*array.List)
if !ok {
return nil, WrapTypeErr("list", chunk.DataType().Name(), pcr.field)
}
stringReader, ok := listReader.ListValues().(*array.String)
if !ok {
return nil, WrapTypeErr("stringArray", chunk.DataType().Name(), pcr.field)
}
offsets := listReader.Offsets()
for i := 1; i < len(offsets); i++ {
start, end := offsets[i-1], offsets[i]
elementData := make([]string, 0, end-start)
for j := start; j < end; j++ {
elementData = append(elementData, stringReader.Value(int(j)))
}
data = append(data, elementData)
}
}
if len(data) == 0 {
return nil, nil
}
return data, nil
}
func ReadNullableStringArrayData(pcr *FieldReader, count int64) (any, []bool, error) {
chunked, err := pcr.columnReader.NextBatch(count)
if err != nil {
return nil, nil, err
}
data := make([][]string, 0, count)
validData := make([]bool, 0, count)
for _, chunk := range chunked.Chunks() {
listReader, ok := chunk.(*array.List)
if !ok {
// the chunk type may be *array.Null if the data in chunk is all null
_, ok := chunk.(*array.Null)
if !ok {
return nil, nil, WrapTypeErr("list|null", chunk.DataType().Name(), pcr.field)
}
dataNums := chunk.Data().Len()
validData = append(validData, make([]bool, dataNums)...)
data = append(data, make([][]string, dataNums)...)
} else {
stringReader, ok := listReader.ListValues().(*array.String)
if !ok {
return nil, nil, WrapTypeErr("stringArray", chunk.DataType().Name(), pcr.field)
}
offsets := listReader.Offsets()
for i := 1; i < len(offsets); i++ {
start, end := offsets[i-1], offsets[i]
elementData := make([]string, 0, end-start)
for j := start; j < end; j++ {
elementData = append(elementData, stringReader.Value(int(j)))
}
data = append(data, elementData)
elementDataValid := true
if start == end {
elementDataValid = false
}
validData = append(validData, elementDataValid)
}
}
}
if len(data) != len(validData) {
return nil, nil, merr.WrapErrParameterInvalid(len(data), len(validData), "length of data is not equal to length of valid_data")
}
if len(data) == 0 {
return nil, nil, nil
}
return data, validData, nil
}
func ReadArrayData(pcr *FieldReader, count int64) (any, error) {
data := make([]*schemapb.ScalarField, 0, count)
maxCapacity, err := parameterutil.GetMaxCapacity(pcr.field)
if err != nil {
return nil, err
}
elementType := pcr.field.GetElementType()
switch elementType {
case schemapb.DataType_Bool:
boolArray, err := ReadBoolArrayData(pcr, count)
if err != nil {
return nil, err
}
if boolArray == nil {
return nil, nil
}
for _, elementArray := range boolArray.([][]bool) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_BoolData{
BoolData: &schemapb.BoolArray{
Data: elementArray,
},
},
})
}
case schemapb.DataType_Int8:
int8Array, err := ReadIntegerOrFloatArrayData[int32](pcr, count)
if err != nil {
return nil, err
}
if int8Array == nil {
return nil, nil
}
for _, elementArray := range int8Array.([][]int32) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_IntData{
IntData: &schemapb.IntArray{
Data: elementArray,
},
},
})
}
case schemapb.DataType_Int16:
int16Array, err := ReadIntegerOrFloatArrayData[int32](pcr, count)
if err != nil {
return nil, err
}
if int16Array == nil {
return nil, nil
}
for _, elementArray := range int16Array.([][]int32) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_IntData{
IntData: &schemapb.IntArray{
Data: elementArray,
},
},
})
}
case schemapb.DataType_Int32:
int32Array, err := ReadIntegerOrFloatArrayData[int32](pcr, count)
if err != nil {
return nil, err
}
if int32Array == nil {
return nil, nil
}
for _, elementArray := range int32Array.([][]int32) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_IntData{
IntData: &schemapb.IntArray{
Data: elementArray,
},
},
})
}
case schemapb.DataType_Int64:
int64Array, err := ReadIntegerOrFloatArrayData[int64](pcr, count)
if err != nil {
return nil, err
}
if int64Array == nil {
return nil, nil
}
for _, elementArray := range int64Array.([][]int64) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_LongData{
LongData: &schemapb.LongArray{
Data: elementArray,
},
},
})
}
case schemapb.DataType_Float:
float32Array, err := ReadIntegerOrFloatArrayData[float32](pcr, count)
if err != nil {
return nil, err
}
if float32Array == nil {
return nil, nil
}
for _, elementArray := range float32Array.([][]float32) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_FloatData{
FloatData: &schemapb.FloatArray{
Data: elementArray,
},
},
})
}
case schemapb.DataType_Double:
float64Array, err := ReadIntegerOrFloatArrayData[float64](pcr, count)
if err != nil {
return nil, err
}
if float64Array == nil {
return nil, nil
}
for _, elementArray := range float64Array.([][]float64) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_DoubleData{
DoubleData: &schemapb.DoubleArray{
Data: elementArray,
},
},
})
}
case schemapb.DataType_VarChar, schemapb.DataType_String:
stringArray, err := ReadStringArrayData(pcr, count)
if err != nil {
return nil, err
}
if stringArray == nil {
return nil, nil
}
for _, elementArray := range stringArray.([][]string) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_StringData{
StringData: &schemapb.StringArray{
Data: elementArray,
},
},
})
}
default:
return nil, merr.WrapErrImportFailed(fmt.Sprintf("unsupported data type '%s' for array field '%s'",
elementType.String(), pcr.field.GetName()))
}
return data, nil
}
func ReadNullableArrayData(pcr *FieldReader, count int64) (any, []bool, error) {
data := make([]*schemapb.ScalarField, 0, count)
maxCapacity, err := parameterutil.GetMaxCapacity(pcr.field)
if err != nil {
return nil, nil, err
}
elementType := pcr.field.GetElementType()
switch elementType {
case schemapb.DataType_Bool:
boolArray, validData, err := ReadNullableBoolArrayData(pcr, count)
if err != nil {
return nil, nil, err
}
if boolArray == nil {
return nil, nil, nil
}
for _, elementArray := range boolArray.([][]bool) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_BoolData{
BoolData: &schemapb.BoolArray{
Data: elementArray,
},
},
})
}
return data, validData, nil
case schemapb.DataType_Int8:
int8Array, validData, err := ReadNullableIntegerOrFloatArrayData[int32](pcr, count)
if err != nil {
return nil, nil, err
}
if int8Array == nil {
return nil, nil, nil
}
for _, elementArray := range int8Array.([][]int32) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_IntData{
IntData: &schemapb.IntArray{
Data: elementArray,
},
},
})
}
return data, validData, nil
case schemapb.DataType_Int16:
int16Array, validData, err := ReadNullableIntegerOrFloatArrayData[int32](pcr, count)
if err != nil {
return nil, nil, err
}
if int16Array == nil {
return nil, nil, nil
}
for _, elementArray := range int16Array.([][]int32) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_IntData{
IntData: &schemapb.IntArray{
Data: elementArray,
},
},
})
}
return data, validData, nil
case schemapb.DataType_Int32:
int32Array, validData, err := ReadNullableIntegerOrFloatArrayData[int32](pcr, count)
if err != nil {
return nil, nil, err
}
if int32Array == nil {
return nil, nil, nil
}
for _, elementArray := range int32Array.([][]int32) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_IntData{
IntData: &schemapb.IntArray{
Data: elementArray,
},
},
})
}
return data, validData, nil
case schemapb.DataType_Int64:
int64Array, validData, err := ReadNullableIntegerOrFloatArrayData[int64](pcr, count)
if err != nil {
return nil, nil, err
}
if int64Array == nil {
return nil, nil, nil
}
for _, elementArray := range int64Array.([][]int64) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_LongData{
LongData: &schemapb.LongArray{
Data: elementArray,
},
},
})
}
return data, validData, nil
case schemapb.DataType_Float:
float32Array, validData, err := ReadNullableIntegerOrFloatArrayData[float32](pcr, count)
if err != nil {
return nil, nil, err
}
if float32Array == nil {
return nil, nil, nil
}
for _, elementArray := range float32Array.([][]float32) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_FloatData{
FloatData: &schemapb.FloatArray{
Data: elementArray,
},
},
})
}
return data, validData, nil
case schemapb.DataType_Double:
float64Array, validData, err := ReadNullableIntegerOrFloatArrayData[float64](pcr, count)
if err != nil {
return nil, nil, err
}
if float64Array == nil {
return nil, nil, nil
}
for _, elementArray := range float64Array.([][]float64) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_DoubleData{
DoubleData: &schemapb.DoubleArray{
Data: elementArray,
},
},
})
}
return data, validData, nil
case schemapb.DataType_VarChar, schemapb.DataType_String:
stringArray, validData, err := ReadNullableStringArrayData(pcr, count)
if err != nil {
return nil, nil, err
}
if stringArray == nil {
return nil, nil, nil
}
for _, elementArray := range stringArray.([][]string) {
if err = common.CheckArrayCapacity(len(elementArray), maxCapacity); err != nil {
return nil, nil, err
}
data = append(data, &schemapb.ScalarField{
Data: &schemapb.ScalarField_StringData{
StringData: &schemapb.StringArray{
Data: elementArray,
},
},
})
}
return data, validData, nil
default:
return nil, nil, merr.WrapErrImportFailed(fmt.Sprintf("unsupported data type '%s' for array field '%s'",
elementType.String(), pcr.field.GetName()))
}
}